DNA in Porin
… We study the interactions of OmpF with pentameric poly-nucleotides (poly-Ns) in silico. The poly-N molecule is forced to translocate…
in-silico Drug Design
…. Two specific endoplasmic reticulum calcium channels, ryanodine receptors (RyRs) and inositol 1,4,5-trisphosphate receptors (IP3Rs) play an important role in…
Membrane Proteins
Taking into account the steps for the folding pathway of α-helical membrane proteins and relating biophysical parameters to each of…
Protein aggregation
Here, we hope to develop valid coarse grained (CG) force filed to study protein aggregation.
Protein folding states
There are many methods to detect protein folding intermediates along MD-based protein folding/unfolding pathway. We study to define new computational…